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bioinformatics:scripts:nature [2014/05/13 21:33] chrissch |
bioinformatics:scripts:nature [2015/10/15 22:37] (current) |
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{{:bioinformatics:scripts:matrix2pca.m.zip}}\\ | {{:bioinformatics:scripts:matrix2pca.m.zip}}\\ | ||
**Author:** Julio Cesar Ignacio-Espinoza\\ | **Author:** Julio Cesar Ignacio-Espinoza\\ | ||
- | **Last Revision:**\\ | + | **Last Revision:** Dec 2013\\ |
**Description:** Matlab list of commands, input is a m x n matrix where m is the number of observations and n is the number of variables measured.\\ | **Description:** Matlab list of commands, input is a m x n matrix where m is the number of observations and n is the number of variables measured.\\ | ||
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{{:bioinformatics:scripts:read2genome.pl.zip}}\\ | {{:bioinformatics:scripts:read2genome.pl.zip}}\\ | ||
**Author:** Julio Cesar Ignacio-Espinoza\\ | **Author:** Julio Cesar Ignacio-Espinoza\\ | ||
- | **Last Revision:**\\ | + | **Last Revision:** Dec 2013\\ |
**Description:** The input files are a blastn file and a reference file. It aligns the best hits to the reference dataset, It outputs a per base frequency of nucleotides along the reference genome.\\ | **Description:** The input files are a blastn file and a reference file. It aligns the best hits to the reference dataset, It outputs a per base frequency of nucleotides along the reference genome.\\ | ||
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{{:bioinformatics:scripts:randomgenome.pl.zip}}\\ | {{:bioinformatics:scripts:randomgenome.pl.zip}}\\ | ||
**Author:** Julio Cesar Ignacio-Espinoza\\ | **Author:** Julio Cesar Ignacio-Espinoza\\ | ||
- | **Last Revision:**\\ | + | **Last Revision:** Dec 2013\\ |
**Description:** The input is the output of read2genome.pl. It generates a set of random contigs based on their per base frequency.\\ | **Description:** The input is the output of read2genome.pl. It generates a set of random contigs based on their per base frequency.\\ | ||
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{{:bioinformatics:scripts:chopgenome.pl.zip}}\\ | {{:bioinformatics:scripts:chopgenome.pl.zip}}\\ | ||
**Author:** Julio Cesar Ignacio-Espinoza\\ | **Author:** Julio Cesar Ignacio-Espinoza\\ | ||
- | **Last Revision:**\\ | + | **Last Revision:** Dec 2013\\ |
**Description:** The input is a fasta file, it outputs a multi fasta file where the original file has been cut. | **Description:** The input is a fasta file, it outputs a multi fasta file where the original file has been cut. | ||