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bioinformatics:scripts:sup05 [2014/04/02 18:42] simroux [Script SUP05 phages] |
bioinformatics:scripts:sup05 [2015/10/15 22:37] (current) |
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===== Cultivation-independent exploration of SUP05 host-virus interactions in a model Oxygen Minimum Zone ===== | ===== Cultivation-independent exploration of SUP05 host-virus interactions in a model Oxygen Minimum Zone ===== | ||
==== Script SUP05 phages ==== | ==== Script SUP05 phages ==== | ||
- | {{:bioinformatics:scripts:SUP05_phages_scripts.zip}} | + | {{:bioinformatics:scripts:SUP05_phages_scripts.zip}}\\ |
- | === Author : === | + | |
- | Simon Roux | + | |
- | === Associate manuscript : === | + | |
- | Cultivation-independent exploration of SUP05 host-virus interactions in a model Oxygen Minimum Zone (Submitted) | + | |
- | Simon Roux1, Alyse K. Hawley2, Monica Torres Beltran2, Melanie Scofield2, Patrick Schwientek3, Ramunas Stepanauskas4, Tanja Woyke3, Steven J. Hallam2,5*, and Matthew B. Sullivan1* | + | **Author:** Simon Roux\\ |
+ | **Associate manuscript:** [[http://elifesciences.org/content/3/e03125#sthash.sskQREWU.dpuf|Roux, S., Hawley, A.K., Torres Beltran, M., Scofield, M., Schwientek, P., Stepanauskas, R., Woyke, T., Hallam, S.J., Sullivan, M.B. (doi:10.7554/eLife.03125). Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell genomics and metagenomics]].\\ | ||
- | Affiliations: | ||
- | 1Ecology and Evolutionary Biology, University of Arizona, USA | ||
- | 2 Department of Microbiology and Immunology, University of British Columbia, Canada | ||
- | 3 DOE Joint Genome Institute, Walnut Creek, California, USA | ||
- | 4 Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, USA | ||
- | 5 Graduate Program in Bioinformatics, University of British Columbia, Canada | ||
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- | Summary: Single-cell amplified genome sequencing uncovers virus-host interactions in uncultivated SUP05 bacteria with relevance to coupled biogeochemical cycling in marine oxygen minimum zones. |